Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.75□□□□□ -0.69
Ybx1P62960 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Ybx1P62960 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.75□□□□□ -0.69
Ybx1P62960 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ybx1P62960 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm22582-201ENSMUST00000102283 94 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm24066-201ENSMUST00000104515 131 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm15132-201ENSMUST00000118581 652 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Mir6396-201ENSMUST00000183603 111 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm5881-201ENSMUST00000204737 367 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC10.74□□□□□ -0.69
Ybx1P62960 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Ybx1P62960 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.74□□□□□ -0.69
Ybx1P62960 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ybx1P62960 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.74□□□□□ -0.69
Ybx1P62960 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 Gm23432-201ENSMUST00000157181 131 ntBASIC10.73□□□□□ -0.69
Ybx1P62960 Gm23999-201ENSMUST00000158057 104 ntBASIC10.73□□□□□ -0.69
Ybx1P62960 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Ybx1P62960 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC10.73□□□□□ -0.69
Ybx1P62960 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ybx1P62960 AC149294.3-201ENSMUST00000226888 732 ntBASIC10.73□□□□□ -0.69
Ybx1P62960 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC10.73□□□□□ -0.69
Ybx1P62960 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ybx1P62960 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.73□□□□□ -0.69
Ybx1P62960 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Ybx1P62960 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ybx1P62960 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ybx1P62960 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.72□□□□□ -0.69
Ybx1P62960 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ybx1P62960 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms