Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm5468-202ENSMUST00000227851 682 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Olfr584-201ENSMUST00000098210 964 ntBASIC9.37□□□□□ -0.91
Lsm3P62311 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Rcbtb2-209ENSMUST00000164822 3531 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Helb-201ENSMUST00000020449 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Lsm3P62311 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lsm3P62311 Fkbp5-202ENSMUST00000114792 3858 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Lsm3P62311 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Chordc1-201ENSMUST00000001825 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Lsm3P62311 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm45694-201ENSMUST00000212022 3251 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Rexo5-202ENSMUST00000084644 2008 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Sez6l2-203ENSMUST00000106335 3732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Ankdd1b-201ENSMUST00000055607 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Lsm3P62311 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm13996-201ENSMUST00000118456 430 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Fancb-203ENSMUST00000167446 2953 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Lsm3P62311 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Lsm3P62311 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm8918-201ENSMUST00000190587 1087 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm37350-201ENSMUST00000192782 313 ntTSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm6677-201ENSMUST00000195100 441 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm5281-201ENSMUST00000197542 2134 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Gm44506-201ENSMUST00000206278 965 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 BX649293.1-201ENSMUST00000227437 631 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Lsm3P62311 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Arhgap26-216ENSMUST00000155576 2280 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Ccna1-201ENSMUST00000029368 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Lsm3P62311 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Zfp655-202ENSMUST00000167316 4104 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.36□□□□□ -0.91
Lsm3P62311 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Lsm3P62311 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Lsm3P62311 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Hnrnpk-221ENSMUST00000177497 2585 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Ano4-204ENSMUST00000182341 3959 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Rab3il1-203ENSMUST00000121418 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm10874-201ENSMUST00000100526 2355 ntTSL 2 BASIC9.35□□□□□ -0.91
Lsm3P62311 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Adgrl2-217ENSMUST00000200154 5412 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Lsm3P62311 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm15824-201ENSMUST00000119516 955 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Lsm3P62311 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.35□□□□□ -0.91
Lsm3P62311 Gm18367-201ENSMUST00000176139 600 ntBASIC9.35□□□□□ -0.91
Lsm3P62311 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms