Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm14193-201ENSMUST00000105067 153 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm14723-201ENSMUST00000118686 215 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm12136-201ENSMUST00000120460 1209 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Hmgb3O54879 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
Hmgb3O54879 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm44551-201ENSMUST00000208804 171 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm7319-201ENSMUST00000210047 778 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 AC154276.3-201ENSMUST00000227643 998 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm23105-201ENSMUST00000083719 134 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 AC125351.1-201ENSMUST00000221438 2223 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm10390-201ENSMUST00000180812 3975 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 AC165080.1-201ENSMUST00000215257 3123 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm42587-201ENSMUST00000198462 1981 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Hmgb3O54879 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm4454-201ENSMUST00000190585 2578 ntBASIC8.55□□□□□ -1.04
Hmgb3O54879 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Hmgb3O54879 Gm9415-201ENSMUST00000200462 1321 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 AC159308.2-201ENSMUST00000213592 2325 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm9978-201ENSMUST00000069431 3273 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm37671-201ENSMUST00000193198 2096 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 n-R5s64-201ENSMUST00000102019 119 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm22920-201ENSMUST00000102175 109 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm22323-201ENSMUST00000103832 109 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm13809-201ENSMUST00000117921 597 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm15615-201ENSMUST00000118876 198 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm15285-201ENSMUST00000119271 473 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm37246-201ENSMUST00000192665 835 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gm44420-201ENSMUST00000203669 490 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 AC153962.4-201ENSMUST00000217878 242 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 AC154589.2-201ENSMUST00000228847 251 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC8.54□□□□□ -1.04
Hmgb3O54879 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hmgb3O54879 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hmgb3O54879 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 163.6 ms