Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm22475-201ENSMUST00000175169 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm22903-201ENSMUST00000175193 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25070-201ENSMUST00000175237 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm24159-201ENSMUST00000175264 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25299-201ENSMUST00000175283 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm23798-201ENSMUST00000175560 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm23802-201ENSMUST00000175565 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25708-201ENSMUST00000177687 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm24370-201ENSMUST00000178007 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm23049-201ENSMUST00000178068 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm28019-201ENSMUST00000178138 101 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25571-201ENSMUST00000178322 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25355-201ENSMUST00000178456 101 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm24975-201ENSMUST00000178492 101 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm23189-201ENSMUST00000178954 102 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm25100-201ENSMUST00000179750 101 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm23064-201ENSMUST00000179866 101 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm28671-201ENSMUST00000187036 692 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm32111-201ENSMUST00000207689 846 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.92□□□□□ -0.66
Chmp2aQ9DB34 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm22582-201ENSMUST00000102283 94 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm25288-201ENSMUST00000122800 265 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm5801-201ENSMUST00000182247 780 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm5870-201ENSMUST00000196461 282 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm45308-201ENSMUST00000210610 415 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chmp2aQ9DB34 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chmp2aQ9DB34 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms