Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Gm11993-201ENSMUST00000121861 820 ntBASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Gm6425-201ENSMUST00000136332 790 ntBASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Gm43097-201ENSMUST00000196867 151 ntBASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Gm42710-201ENSMUST00000200608 985 ntBASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm11996-201ENSMUST00000117538 915 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm11475-201ENSMUST00000118482 476 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm25288-201ENSMUST00000122800 265 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm15620-201ENSMUST00000122949 270 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm4862-201ENSMUST00000170405 438 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm25517-201ENSMUST00000083865 134 ntBASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pcdhga4Q91XY4 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Pcdhga4Q91XY4 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms