Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm14277-201ENSMUST00000121195 360 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm8197-202ENSMUST00000193422 934 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Mir7686-201ENSMUST00000200604 57 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm25580-201ENSMUST00000083409 327 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm36752-201ENSMUST00000220527 1546 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 4930511J24Rik-201ENSMUST00000223541 1528 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Serping1-202ENSMUST00000111641 1665 ntTSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm8899-201ENSMUST00000214635 1332 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 AC121860.1-201ENSMUST00000227908 2787 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm42638-201ENSMUST00000196065 2587 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm19927-201ENSMUST00000185792 781 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm43811-201ENSMUST00000202862 695 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm33080-201ENSMUST00000205429 172 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm5130-201ENSMUST00000210233 959 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm18164-201ENSMUST00000213769 927 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm18166-201ENSMUST00000215557 927 ntBASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccdc28bQ8CEG5 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms