Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm12345-201ENSMUST00000119288 898 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm28391-201ENSMUST00000185202 379 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm29528-201ENSMUST00000186699 379 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm29526-201ENSMUST00000187217 379 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm8918-201ENSMUST00000190587 1087 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 AC130217.1-201ENSMUST00000224146 909 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Cntrl-202ENSMUST00000028237 7615 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nod1Q8BHB0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm25561-201ENSMUST00000104607 125 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm17797-201ENSMUST00000182175 997 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm5865-201ENSMUST00000198713 637 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm19566-201ENSMUST00000199576 610 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm18122-201ENSMUST00000211390 904 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 AC165260.2-201ENSMUST00000225371 395 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm7190-201ENSMUST00000118669 1452 ntBASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nod1Q8BHB0 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nod1Q8BHB0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms