Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC163041.2-201ENSMUST00000223082 573 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm43625-201ENSMUST00000199177 1539 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm23021-201ENSMUST00000158765 169 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm22347-201ENSMUST00000180276 132 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm2324-201ENSMUST00000187464 662 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm28167-201ENSMUST00000187644 550 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm42710-201ENSMUST00000200608 985 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm44920-201ENSMUST00000206503 746 ntTSL 5 BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 AC124715.1-201ENSMUST00000228480 754 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Gm42731-201ENSMUST00000201839 1641 ntBASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Spg11Q3UHA3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 AC139845.1-201ENSMUST00000147013 1334 ntTSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm13197-201ENSMUST00000117204 225 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm18822-201ENSMUST00000182857 1025 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm18471-201ENSMUST00000208272 452 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 AC100406.1-201ENSMUST00000217305 480 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm43290-201ENSMUST00000200359 1557 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Mir688-201ENSMUST00000102055 75 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm11882-201ENSMUST00000121463 506 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Ccdc190-202ENSMUST00000175731 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm26736-201ENSMUST00000180425 1236 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm28115-201ENSMUST00000188985 360 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Igkv12-42-201ENSMUST00000198769 327 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm43903-201ENSMUST00000205126 617 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Gm45134-201ENSMUST00000206046 1189 ntBASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Zfp819-202ENSMUST00000116324 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Spg11Q3UHA3 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Spg11Q3UHA3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms