Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm11380-201ENSMUST00000118067 560 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm8022-201ENSMUST00000191763 904 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 AC157650.1-201ENSMUST00000224582 610 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Gm46218-202ENSMUST00000215520 1956 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trim43aQ3TL54 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm22876-201ENSMUST00000175450 298 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Mir8091-201ENSMUST00000183602 139 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Mir6366-201ENSMUST00000184472 82 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm29155-201ENSMUST00000185910 269 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm28324-201ENSMUST00000187913 264 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm34023-201ENSMUST00000195539 217 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm9102-201ENSMUST00000219250 465 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trim43aQ3TL54 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Gm8216-201ENSMUST00000117232 601 ntBASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms