Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Pfn4-201ENSMUST00000020967 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 AC154862.1-201ENSMUST00000225060 1763 ntBASIC15.34■□□□□ 0.05
Chd1P40201 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Gm13685-201ENSMUST00000122462 141 ntBASIC15.34■□□□□ 0.05
Chd1P40201 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd1P40201 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chd1P40201 Gm20844-201ENSMUST00000186101 654 ntBASIC15.34■□□□□ 0.05
Chd1P40201 Gm20921-201ENSMUST00000188265 652 ntBASIC15.34■□□□□ 0.05
Chd1P40201 Gm7776-201ENSMUST00000191211 720 ntBASIC15.34■□□□□ 0.05
Chd1P40201 Gm46142-201ENSMUST00000213332 481 ntBASIC15.34■□□□□ 0.05
Chd1P40201 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC15.34■□□□□ 0.05
Chd1P40201 Olfr132-201ENSMUST00000087128 942 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chd1P40201 Ctf2-202ENSMUST00000206038 1825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chd1P40201 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd1P40201 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chd1P40201 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Chd1P40201 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chd1P40201 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Chd1P40201 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Wfdc6a-202ENSMUST00000109342 796 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Chd1P40201 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Chd1P40201 Gm28677-202ENSMUST00000186904 615 ntBASIC15.33■□□□□ 0.04
Chd1P40201 Gm44576-201ENSMUST00000208876 411 ntBASIC15.33■□□□□ 0.04
Chd1P40201 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Chd1P40201 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC15.33■□□□□ 0.04
Chd1P40201 Sncg-201ENSMUST00000023826 852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Chd1P40201 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Olfr523-201ENSMUST00000055890 1056 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Chd1P40201 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chd1P40201 Gm7125-201ENSMUST00000093430 273 ntBASIC15.33■□□□□ 0.04
Chd1P40201 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Chd1P40201 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Chd1P40201 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd1P40201 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chd1P40201 Rps10-ps4-201ENSMUST00000120308 492 ntBASIC15.32■□□□□ 0.04
Chd1P40201 Gm3244-201ENSMUST00000120938 390 ntBASIC15.32■□□□□ 0.04
Chd1P40201 Gm6285-201ENSMUST00000122012 498 ntBASIC15.32■□□□□ 0.04
Chd1P40201 Gm15247-201ENSMUST00000124513 403 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 A330094K24Rik-201ENSMUST00000180530 1027 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Gm27941-201ENSMUST00000183418 142 ntBASIC15.32■□□□□ 0.04
Chd1P40201 Mir6922-201ENSMUST00000185099 66 ntBASIC15.32■□□□□ 0.04
Chd1P40201 Gm6375-201ENSMUST00000205201 1145 ntBASIC15.32■□□□□ 0.04
Chd1P40201 AC167017.1-201ENSMUST00000214975 412 ntBASIC15.32■□□□□ 0.04
Chd1P40201 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC15.32■□□□□ 0.04
Chd1P40201 1700017D01Rik-201ENSMUST00000025635 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Chd1P40201 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chd1P40201 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chd1P40201 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC15.32■□□□□ 0.04
Chd1P40201 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Chd1P40201 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Chd1P40201 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC15.32■□□□□ 0.04
Chd1P40201 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd1P40201 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Gm7684-201ENSMUST00000211891 829 ntBASIC15.31■□□□□ 0.04
Chd1P40201 Pqbp1-201ENSMUST00000033497 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Tigd4-201ENSMUST00000062623 3459 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chd1P40201 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 1700110I01Rik-202ENSMUST00000112812 1737 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chd1P40201 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chd1P40201 Gm18345-201ENSMUST00000200710 1390 ntBASIC15.31■□□□□ 0.04
Chd1P40201 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Gm43737-201ENSMUST00000199915 2740 ntBASIC15.31■□□□□ 0.04
Chd1P40201 Mipol1-205ENSMUST00000145003 1424 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1P40201 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms