Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12□□□□□ -0.49
Vcam1P29533 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vcam1P29533 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vcam1P29533 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Vcam1P29533 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vcam1P29533 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm43817-201ENSMUST00000196459 2262 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Mir744-201ENSMUST00000103261 100 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm24161-201ENSMUST00000104592 130 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm15285-201ENSMUST00000119271 473 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm13624-201ENSMUST00000120263 462 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm26875-201ENSMUST00000181006 950 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.99□□□□□ -0.49
Vcam1P29533 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm29304-201ENSMUST00000186555 695 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm29223-201ENSMUST00000188867 695 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm5259-201ENSMUST00000191231 800 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.99□□□□□ -0.49
Vcam1P29533 Spin3-ps-201ENSMUST00000192825 770 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm44139-201ENSMUST00000204903 373 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm19121-201ENSMUST00000215720 1022 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.99□□□□□ -0.49
Vcam1P29533 CT025547.1-201ENSMUST00000225127 578 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 AC161581.1-201ENSMUST00000228696 318 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Cyp2d9-201ENSMUST00000089129 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.99□□□□□ -0.49
Vcam1P29533 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vcam1P29533 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.99□□□□□ -0.49
Vcam1P29533 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Vcam1P29533 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC11.98□□□□□ -0.49
Vcam1P29533 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vcam1P29533 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.98□□□□□ -0.49
Vcam1P29533 Gm12221-201ENSMUST00000125096 1131 ntBASIC11.98□□□□□ -0.49
Vcam1P29533 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms