Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm37464-201ENSMUST00000192431 2220 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm37446-201ENSMUST00000193015 4136 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm23200-201ENSMUST00000104379 132 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm14193-201ENSMUST00000105067 153 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm12997-201ENSMUST00000120207 640 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm15595-201ENSMUST00000120840 961 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm11736-201ENSMUST00000121468 505 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm37852-201ENSMUST00000193027 350 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm7848-201ENSMUST00000210739 718 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 BC030343-201ENSMUST00000199606 2439 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 CT572985.1-201ENSMUST00000220599 4714 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 1300002E11Rik-201ENSMUST00000180830 3557 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Dnajc14-201ENSMUST00000026410 4229 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm42777-201ENSMUST00000196026 3603 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ube4bQ9ES00 Gm37459-201ENSMUST00000192259 2840 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Slc7a9-201ENSMUST00000032703 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 9230112E08Rik-202ENSMUST00000189441 3352 ntBASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm24844-201ENSMUST00000158679 127 ntBASIC9.98□□□□□ -0.81
Ube4bQ9ES00 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm5266-201ENSMUST00000187302 1162 ntBASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm9619-201ENSMUST00000211587 762 ntBASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Nrf1-205ENSMUST00000115200 2491 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm43481-201ENSMUST00000201715 3672 ntBASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ube4bQ9ES00 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Nlrc5-207ENSMUST00000211816 7578 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ube4bQ9ES00 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms