Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm19090-201ENSMUST00000218187 774 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 AC192333.3-201ENSMUST00000224041 463 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm4865-201ENSMUST00000196284 1309 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm13120-201ENSMUST00000117343 1446 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm7190-201ENSMUST00000118669 1452 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Nkx6-1Q99MA9 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm16480-201ENSMUST00000120439 832 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm22994-201ENSMUST00000175422 82 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Mir6934-201ENSMUST00000183965 62 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm9515-201ENSMUST00000200276 647 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 AC173482.3-201ENSMUST00000225492 1212 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 CT025618.1-201ENSMUST00000227409 1279 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 AC123061.1-201ENSMUST00000228021 999 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm9790-201ENSMUST00000054148 288 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm26440-201ENSMUST00000082591 129 ntBASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Nkx6-1Q99MA9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Nkx6-1Q99MA9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms