Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Ctnnd1-202ENSMUST00000066177 5044 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm37464-201ENSMUST00000192431 2220 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm42488-201ENSMUST00000197648 3225 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm12389-201ENSMUST00000117696 418 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm23699-201ENSMUST00000158835 135 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm43671-201ENSMUST00000200422 433 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm5881-201ENSMUST00000204737 367 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm9899-201ENSMUST00000065519 555 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Olfr582-201ENSMUST00000098212 960 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm45705-201ENSMUST00000211831 2134 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Gm44815-201ENSMUST00000206812 1633 ntBASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccdc28bQ8CEG5 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm9978-201ENSMUST00000069431 3273 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Nedd4l-211ENSMUST00000226058 3393 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm23200-201ENSMUST00000104379 132 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm11952-201ENSMUST00000121172 821 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm3828-201ENSMUST00000121817 257 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm25343-201ENSMUST00000157460 107 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Id2-203ENSMUST00000222667 958 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 BC030343-201ENSMUST00000199606 2439 ntBASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 C86187-202ENSMUST00000209497 2415 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ccdc28bQ8CEG5 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Col10a1-201ENSMUST00000105511 3130 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ccdc28bQ8CEG5 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms