Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Usp40Q8BWR4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm14370-201ENSMUST00000122460 868 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm15273-201ENSMUST00000142302 868 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm7023-201ENSMUST00000147295 868 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm14357-201ENSMUST00000178352 868 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm14361-201ENSMUST00000178547 868 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm14348-201ENSMUST00000179183 868 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm29808-201ENSMUST00000194419 468 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm17815-201ENSMUST00000198305 895 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm30652-201ENSMUST00000199103 430 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 AC123533.3-201ENSMUST00000228056 454 ntBASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp40Q8BWR4 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm45501-201ENSMUST00000211468 2526 ntBASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm4775-201ENSMUST00000169588 402 ntBASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gm31763-202ENSMUST00000218205 1724 ntBASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp40Q8BWR4 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Mir744-201ENSMUST00000103261 100 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm12470-201ENSMUST00000117239 1049 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm13700-201ENSMUST00000118624 1128 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm37020-201ENSMUST00000195303 992 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm4866-201ENSMUST00000197408 589 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm7924-201ENSMUST00000203975 785 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms