Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm3712-201ENSMUST00000118523 2071 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm22582-201ENSMUST00000102283 94 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm25766-201ENSMUST00000104101 131 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Snord23-201ENSMUST00000116828 109 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm23153-201ENSMUST00000175323 313 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gm10752-201ENSMUST00000218348 729 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC11.09□□□□□ -0.63
Trim43aQ3TL54 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim43aQ3TL54 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm12795-201ENSMUST00000117594 539 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm12274-201ENSMUST00000120062 385 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm24398-201ENSMUST00000157870 109 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm7880-201ENSMUST00000203748 871 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.08□□□□□ -0.64
Trim43aQ3TL54 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.07□□□□□ -0.64
Trim43aQ3TL54 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms