Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm8991-201ENSMUST00000073014 1075 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm26205-201ENSMUST00000082907 134 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gm3372-201ENSMUST00000198806 1792 ntBASIC13.16□□□□□ -0.3
Smarcc1P97496 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smarcc1P97496 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smarcc1P97496 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC13.16□□□□□ -0.3
Smarcc1P97496 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm5071-201ENSMUST00000104922 1035 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm12011-201ENSMUST00000119734 618 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm16210-201ENSMUST00000122161 610 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm5191-201ENSMUST00000222882 1236 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 AC157650.1-201ENSMUST00000224582 610 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 AC242269.1-201ENSMUST00000227020 741 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm4883-201ENSMUST00000085702 528 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm37697-201ENSMUST00000195680 1844 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 AC154575.1-201ENSMUST00000227166 1474 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.15□□□□□ -0.3
Smarcc1P97496 AC147366.2-201ENSMUST00000226859 2038 ntBASIC13.15□□□□□ -0.3
Smarcc1P97496 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smarcc1P97496 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcc1P97496 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Smarcc1P97496 Gm29358-202ENSMUST00000187941 3227 ntBASIC13.15□□□□□ -0.31
Smarcc1P97496 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcc1P97496 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC13.14□□□□□ -0.31
Smarcc1P97496 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm8754-201ENSMUST00000118391 520 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm14108-201ENSMUST00000122234 494 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm24368-201ENSMUST00000175388 106 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm22616-201ENSMUST00000179783 100 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm18299-201ENSMUST00000192026 636 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm2328-201ENSMUST00000193525 535 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm37232-201ENSMUST00000194887 367 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Gm18621-201ENSMUST00000222677 679 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 AC132881.1-201ENSMUST00000223780 1062 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 AC163646.3-201ENSMUST00000228879 772 ntBASIC13.14□□□□□ -0.31
Smarcc1P97496 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smarcc1P97496 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms