Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.98□□□□□ -0.81
Cdx2P43241 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Gm8809-201ENSMUST00000119367 743 ntBASIC9.98□□□□□ -0.81
Cdx2P43241 Gm6500-201ENSMUST00000119412 451 ntBASIC9.98□□□□□ -0.81
Cdx2P43241 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC9.98□□□□□ -0.81
Cdx2P43241 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC9.98□□□□□ -0.81
Cdx2P43241 Gm42780-201ENSMUST00000197083 734 ntBASIC9.98□□□□□ -0.81
Cdx2P43241 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.98□□□□□ -0.81
Cdx2P43241 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC9.98□□□□□ -0.81
Cdx2P43241 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.98□□□□□ -0.81
Cdx2P43241 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Cdx2P43241 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Cdx2P43241 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Cdx2P43241 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Cdx2P43241 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm42731-201ENSMUST00000201839 1641 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.97□□□□□ -0.81
Cdx2P43241 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Cdx2P43241 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm13303-201ENSMUST00000117125 1284 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm13002-201ENSMUST00000119286 682 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm15554-201ENSMUST00000120406 913 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm14370-201ENSMUST00000122460 868 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm15273-201ENSMUST00000142302 868 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm7023-201ENSMUST00000147295 868 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm23479-201ENSMUST00000158876 122 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm14357-201ENSMUST00000178352 868 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm14361-201ENSMUST00000178547 868 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm14348-201ENSMUST00000179183 868 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm38145-201ENSMUST00000192319 693 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm5845-201ENSMUST00000195812 796 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 AC164614.1-201ENSMUST00000216038 397 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 AC242269.1-201ENSMUST00000227020 741 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 AC123533.3-201ENSMUST00000228056 454 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm8991-201ENSMUST00000073014 1075 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Krtap6-3-201ENSMUST00000079151 444 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm4883-201ENSMUST00000085702 528 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Cdx2P43241 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm12097-201ENSMUST00000121523 1414 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Gm38220-201ENSMUST00000195774 1447 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.97□□□□□ -0.81
Cdx2P43241 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Gm38309-201ENSMUST00000192063 1518 ntBASIC9.97□□□□□ -0.81
Cdx2P43241 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cdx2P43241 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Cdx2P43241 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Cdx2P43241 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Cdx2P43241 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cdx2P43241 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms