Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm13197-201ENSMUST00000117204 225 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm16077-201ENSMUST00000121915 655 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm43628-201ENSMUST00000197871 1187 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc188F6WEU2 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm36990-201ENSMUST00000191961 1412 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm19173-201ENSMUST00000204494 1523 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 n-R5s2-201ENSMUST00000101968 119 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 n-R5s194-201ENSMUST00000104719 119 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm12188-201ENSMUST00000117387 310 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm6500-201ENSMUST00000119412 451 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm8832-201ENSMUST00000119890 395 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm5389-201ENSMUST00000120893 1176 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 n-R5s112-201ENSMUST00000178208 119 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 n-R5s125-201ENSMUST00000179377 119 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 n-R5s120-201ENSMUST00000180000 119 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Etv3l-201ENSMUST00000193196 325 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm37643-201ENSMUST00000195369 1260 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm17815-201ENSMUST00000198305 895 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 AC154528.3-201ENSMUST00000228011 679 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm23037-201ENSMUST00000083874 324 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 n-R5s33-201ENSMUST00000093713 119 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Gm15953-201ENSMUST00000117656 1732 ntBASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc188F6WEU2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms