Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm16486-201ENSMUST00000212436 4584 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm6425-201ENSMUST00000136332 790 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm8723-201ENSMUST00000166076 820 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm8701-201ENSMUST00000169259 874 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sec61a2Q9JLR1 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm11675-201ENSMUST00000121873 832 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm12628-201ENSMUST00000122193 382 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm5529-201ENSMUST00000165691 891 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Mir7035-201ENSMUST00000184713 82 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm28833-201ENSMUST00000189671 559 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm37365-201ENSMUST00000193109 409 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm6677-201ENSMUST00000195100 441 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm44155-201ENSMUST00000203923 412 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm5881-201ENSMUST00000204737 367 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm8162-201ENSMUST00000213951 665 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm8255-201ENSMUST00000218693 305 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Gm42499-201ENSMUST00000196193 1412 ntBASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sec61a2Q9JLR1 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms