Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh15Q99PJ1 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh15Q99PJ1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh15Q99PJ1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh15Q99PJ1 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh15Q99PJ1 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh15Q99PJ1 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm32255-201ENSMUST00000219456 1349 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 n-R5s2-201ENSMUST00000101968 119 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 n-R5s194-201ENSMUST00000104719 119 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm13397-201ENSMUST00000119562 878 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm6341-201ENSMUST00000119683 411 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm13450-201ENSMUST00000121107 167 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 9230117E06Rik-201ENSMUST00000159309 497 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 n-R5s112-201ENSMUST00000178208 119 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 n-R5s125-201ENSMUST00000179377 119 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 n-R5s120-201ENSMUST00000180000 119 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm43787-201ENSMUST00000197792 1037 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Sprr1a-201ENSMUST00000054599 806 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Mir25-201ENSMUST00000083460 84 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 n-R5s33-201ENSMUST00000093713 119 ntBASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh15Q99PJ1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm28922-201ENSMUST00000189785 308 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Eda2r-202ENSMUST00000113832 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 AC154729.1-201ENSMUST00000224481 1501 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm14504-201ENSMUST00000119391 1497 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mageb2-201ENSMUST00000101397 1143 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm14182-201ENSMUST00000119334 210 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm12192-201ENSMUST00000120146 487 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 1810021B22Rik-205ENSMUST00000162579 544 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm17084-201ENSMUST00000163843 511 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 2900076A07Rik-207ENSMUST00000181492 720 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm26931-201ENSMUST00000182273 609 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mir6378-201ENSMUST00000183357 107 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Catspere1-201ENSMUST00000194528 2949 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mageb1-201ENSMUST00000072269 1143 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mir195a-201ENSMUST00000083477 94 ntBASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Mageb1-202ENSMUST00000099471 993 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Pcdh15Q99PJ1 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms