Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Clrn1Q8K445 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Defa-ps4-201ENSMUST00000118021 183 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm4430-202ENSMUST00000193902 1041 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm37723-201ENSMUST00000194480 565 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm42803-201ENSMUST00000201051 451 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Gm43811-201ENSMUST00000202862 695 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.9□□□□□ -0.82
Clrn1Q8K445 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Clrn1Q8K445 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clrn1Q8K445 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.9□□□□□ -0.83
Clrn1Q8K445 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clrn1Q8K445 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Clrn1Q8K445 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clrn1Q8K445 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clrn1Q8K445 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Clrn1Q8K445 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm22582-201ENSMUST00000102283 94 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm12947-201ENSMUST00000116114 420 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm8216-201ENSMUST00000117232 601 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.89□□□□□ -0.83
Clrn1Q8K445 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm23647-201ENSMUST00000175042 109 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm22877-201ENSMUST00000175451 105 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Rn5s-201ENSMUST00000177555 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s121-201ENSMUST00000177589 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s146-201ENSMUST00000177889 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm22109-201ENSMUST00000177995 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm22291-201ENSMUST00000178027 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s141-201ENSMUST00000178066 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm23284-201ENSMUST00000178069 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s100-201ENSMUST00000178106 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s111-201ENSMUST00000178203 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s105-201ENSMUST00000178499 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s149-201ENSMUST00000178520 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s103-201ENSMUST00000178755 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s123-201ENSMUST00000178804 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s142-201ENSMUST00000178820 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s144-201ENSMUST00000178859 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s139-201ENSMUST00000178975 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s134-201ENSMUST00000178983 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 n-R5s136-201ENSMUST00000179080 119 ntBASIC9.89□□□□□ -0.83
Clrn1Q8K445 Gm25018-201ENSMUST00000179081 119 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms