Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trim9Q8C7M3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm14113-201ENSMUST00000121399 976 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm11354-201ENSMUST00000121974 422 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm25288-201ENSMUST00000122800 265 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm42430-201ENSMUST00000197209 616 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm42751-201ENSMUST00000198065 559 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm8083-201ENSMUST00000203976 475 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trim9Q8C7M3 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Trim9Q8C7M3 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trim9Q8C7M3 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.52□□□□□ -0.56
Trim9Q8C7M3 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim9Q8C7M3 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim9Q8C7M3 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim9Q8C7M3 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim9Q8C7M3 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm11701-201ENSMUST00000121277 1142 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm11988-201ENSMUST00000122321 1069 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm26272-201ENSMUST00000179241 132 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm27440-201ENSMUST00000184785 107 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm5905-201ENSMUST00000211731 580 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm6390-201ENSMUST00000215034 589 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm26782-203ENSMUST00000227103 751 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm38199-201ENSMUST00000192013 3277 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 CT025639.2-202ENSMUST00000225298 1630 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Gm37484-201ENSMUST00000195378 2523 ntBASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms