Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rad54bQ6PFE3 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC10.56□□□□□ -0.72
Rad54bQ6PFE3 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.56□□□□□ -0.72
Rad54bQ6PFE3 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rad54bQ6PFE3 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm12645-201ENSMUST00000117297 275 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm16030-201ENSMUST00000159098 603 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm37141-201ENSMUST00000191938 422 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm45258-201ENSMUST00000210042 853 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm7344-201ENSMUST00000212122 1222 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rad54bQ6PFE3 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Mir291b-201ENSMUST00000104838 79 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm11451-201ENSMUST00000118946 630 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm6881-201ENSMUST00000121811 833 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm22138-201ENSMUST00000158748 128 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Mir7070-201ENSMUST00000183657 86 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm43138-201ENSMUST00000199123 708 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm42657-201ENSMUST00000201746 211 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm45550-201ENSMUST00000209380 946 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm5905-201ENSMUST00000211731 580 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm45501-201ENSMUST00000211468 2526 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gm32914-201ENSMUST00000203815 2228 ntBASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rad54bQ6PFE3 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms