Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 AC165148.1-201ENSMUST00000224795 2372 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm13019-201ENSMUST00000120000 276 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm14231-201ENSMUST00000120090 592 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm11736-201ENSMUST00000121468 505 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm13182-201ENSMUST00000122241 312 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm26134-201ENSMUST00000178484 110 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm37671-201ENSMUST00000193198 2096 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm37302-201ENSMUST00000192958 2998 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm14892-201ENSMUST00000117636 267 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm44304-201ENSMUST00000200509 145 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 AC154575.1-201ENSMUST00000227166 1474 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim43aQ3TL54 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms