Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ddx6P54823 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Ddx6P54823 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Ddx6P54823 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ddx6P54823 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Ddx6P54823 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ddx6P54823 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Ddx6P54823 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Ddx6P54823 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ddx6P54823 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Gm12377-201ENSMUST00000118656 252 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 Gm12435-201ENSMUST00000118949 1016 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Gm12254-201ENSMUST00000134617 471 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC10.7□□□□□ -0.7
Ddx6P54823 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.7□□□□□ -0.7
Ddx6P54823 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Ddx6P54823 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Ddx6P54823 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Ddx6P54823 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.7□□□□□ -0.7
Ddx6P54823 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Ddx6P54823 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ddx6P54823 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Ddx6P54823 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Spata33-207ENSMUST00000212760 4074 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ddx6P54823 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ddx6P54823 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC10.69□□□□□ -0.7
Ddx6P54823 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm8848-201ENSMUST00000197270 1343 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ddx6P54823 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm24981-201ENSMUST00000104459 132 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm25394-201ENSMUST00000157338 133 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm23081-201ENSMUST00000157845 297 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm26174-201ENSMUST00000158415 219 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm7251-201ENSMUST00000182661 1009 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm7833-201ENSMUST00000183288 990 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm37390-201ENSMUST00000192452 872 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm17936-201ENSMUST00000199413 988 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC10.69□□□□□ -0.7
Ddx6P54823 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm5040-201ENSMUST00000218609 800 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 AC165260.2-201ENSMUST00000225371 395 ntBASIC10.69□□□□□ -0.7
Ddx6P54823 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ddx6P54823 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms