Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm21759-201ENSMUST00000178345 1828 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm25053-201ENSMUST00000103982 133 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm25922-201ENSMUST00000104281 130 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm13351-201ENSMUST00000118087 414 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Mup-ps14-201ENSMUST00000118437 532 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm15057-201ENSMUST00000121516 534 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC8.6□□□□□ -1.03
Hoxd3P09027 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm24679-201ENSMUST00000158762 111 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm18358-201ENSMUST00000173179 1277 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm16958-202ENSMUST00000181792 830 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm8604-201ENSMUST00000183150 965 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm18776-201ENSMUST00000188833 654 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm25053-202ENSMUST00000199731 132 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm8703-201ENSMUST00000203793 730 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm46136-201ENSMUST00000214730 565 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm18514-201ENSMUST00000218980 436 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 AC160929.1-201ENSMUST00000221247 415 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Arhgef33-210ENSMUST00000225548 456 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 AC154184.3-201ENSMUST00000225620 1090 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 AC108945.1-201ENSMUST00000226477 94 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Mro-206ENSMUST00000179472 2194 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm43152-201ENSMUST00000202495 1638 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Gm7964-201ENSMUST00000051522 1378 ntBASIC8.6□□□□□ -1.03
Hoxd3P09027 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC8.6□□□□□ -1.03
Hoxd3P09027 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hoxd3P09027 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Snx7-205ENSMUST00000198499 1314 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms