Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.83□□□□□ -0.68
Atf6F6VAN0 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.83□□□□□ -0.68
Atf6F6VAN0 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Atf6F6VAN0 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.83□□□□□ -0.68
Atf6F6VAN0 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm15604-201ENSMUST00000118350 1456 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm22582-201ENSMUST00000102283 94 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm22442-201ENSMUST00000157256 144 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm9574-201ENSMUST00000173127 845 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm25072-201ENSMUST00000175233 235 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm5805-201ENSMUST00000072779 456 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.82□□□□□ -0.68
Atf6F6VAN0 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Atf6F6VAN0 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.81□□□□□ -0.68
Atf6F6VAN0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.81□□□□□ -0.68
Atf6F6VAN0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.81□□□□□ -0.68
Atf6F6VAN0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.81□□□□□ -0.68
Atf6F6VAN0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Atf6F6VAN0 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atf6F6VAN0 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Atf6F6VAN0 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms