Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 n-R5s134-201ENSMUST00000178983 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s136-201ENSMUST00000179080 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm25018-201ENSMUST00000179081 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s104-201ENSMUST00000179107 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s113-201ENSMUST00000179143 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s133-201ENSMUST00000179275 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s117-201ENSMUST00000179431 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm25212-201ENSMUST00000179432 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s138-201ENSMUST00000179476 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s122-201ENSMUST00000179500 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s143-201ENSMUST00000179542 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s107-201ENSMUST00000179704 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm26391-201ENSMUST00000179843 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s110-201ENSMUST00000179995 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s128-201ENSMUST00000180096 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s124-201ENSMUST00000180334 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Ighv5-8-202ENSMUST00000191967 337 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm7939-201ENSMUST00000201233 1050 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 BC080696-201ENSMUST00000202858 1218 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm24089-201ENSMUST00000093696 109 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm45124-201ENSMUST00000206723 2755 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm14006-201ENSMUST00000122132 981 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm24294-201ENSMUST00000158295 277 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm27675-201ENSMUST00000184527 94 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 AC124613.1-201ENSMUST00000198711 88 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Map1a-202ENSMUST00000110639 10145 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Prss23os-202ENSMUST00000179361 1362 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Ighv13-1-201ENSMUST00000103480 294 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm8019-201ENSMUST00000119317 587 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm15815-201ENSMUST00000120569 255 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm4917-201ENSMUST00000121452 650 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Mir8091-201ENSMUST00000183602 139 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Gm37723-201ENSMUST00000194480 565 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC8.8□□□□□ -1
Usf3B2RUQ2 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC8.8□□□□□ -1
Usf3B2RUQ2 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC8.8□□□□□ -1
Usf3B2RUQ2 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 AC154407.1-201ENSMUST00000226777 526 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Usf3B2RUQ2 AC154220.1-201ENSMUST00000225033 1705 ntBASIC8.8□□□□□ -1
Usf3B2RUQ2 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Usf3B2RUQ2 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC8.8□□□□□ -1
Usf3B2RUQ2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms