Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm42710-201ENSMUST00000200608 985 ntBASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm44640-201ENSMUST00000206894 247 ntBASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm7319-201ENSMUST00000210047 778 ntBASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm6478-201ENSMUST00000099450 742 ntBASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Daam2-201ENSMUST00000057610 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp2aQ9DB34 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm23061-201ENSMUST00000102348 116 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm11801-201ENSMUST00000117807 746 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm11578-201ENSMUST00000118530 459 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Mir6941-201ENSMUST00000184711 59 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Chmp2aQ9DB34 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm11475-201ENSMUST00000118482 476 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm15003-201ENSMUST00000118884 446 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms