Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trim13Q9CYB0 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Rnf165-201ENSMUST00000026494 7300 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm45597-201ENSMUST00000211524 1994 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm38313-201ENSMUST00000191953 1266 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm38170-201ENSMUST00000195404 816 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 CT025642.1-201ENSMUST00000224734 1219 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm1821-202ENSMUST00000227415 750 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trim13Q9CYB0 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Topaz1-201ENSMUST00000178679 5030 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm23251-201ENSMUST00000103773 110 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm11411-201ENSMUST00000117951 719 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm13422-201ENSMUST00000118834 504 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm10774-201ENSMUST00000188689 204 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm43138-201ENSMUST00000199123 708 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm44551-201ENSMUST00000208804 171 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Mt1-202ENSMUST00000211807 1085 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 AC154252.1-201ENSMUST00000226041 473 ntBASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trim13Q9CYB0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms