Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.42□□□□□ -0.42
Col20a1Q923P0 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.42□□□□□ -0.42
Col20a1Q923P0 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.42□□□□□ -0.42
Col20a1Q923P0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col20a1Q923P0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm11771-201ENSMUST00000118124 732 ntBASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm6500-201ENSMUST00000119412 451 ntBASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm14176-201ENSMUST00000121302 477 ntBASIC12.41□□□□□ -0.42
Col20a1Q923P0 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Ighv1-70-201ENSMUST00000196509 351 ntBASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.41□□□□□ -0.42
Col20a1Q923P0 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.41□□□□□ -0.42
Col20a1Q923P0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col20a1Q923P0 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.4□□□□□ -0.42
Col20a1Q923P0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm11929-201ENSMUST00000118175 945 ntBASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm14997-201ENSMUST00000119232 636 ntBASIC12.4□□□□□ -0.42
Col20a1Q923P0 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm17782-201ENSMUST00000174345 880 ntBASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm22994-201ENSMUST00000175422 82 ntBASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm44540-201ENSMUST00000205640 354 ntBASIC12.4□□□□□ -0.42
Col20a1Q923P0 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col20a1Q923P0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Col20a1Q923P0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col20a1Q923P0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Col20a1Q923P0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Col20a1Q923P0 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col20a1Q923P0 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col20a1Q923P0 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.39□□□□□ -0.43
Col20a1Q923P0 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col20a1Q923P0 Gm13426-201ENSMUST00000117887 795 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms