Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Syne3Q4FZC9 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm16397-201ENSMUST00000122201 494 ntBASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm7719-201ENSMUST00000182374 975 ntBASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm9487-201ENSMUST00000216600 472 ntBASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.17□□□□□ -0.62
Syne3Q4FZC9 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.17□□□□□ -0.62
Syne3Q4FZC9 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm19972-201ENSMUST00000218180 5664 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm14993-201ENSMUST00000121180 164 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm19587-201ENSMUST00000191395 545 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm4903-201ENSMUST00000210462 405 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Gm9220-201ENSMUST00000190721 2544 ntBASIC11.16□□□□□ -0.62
Syne3Q4FZC9 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms