Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 D030055H07Rik-201ENSMUST00000143956 2712 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm4454-201ENSMUST00000190585 2578 ntBASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm37458-201ENSMUST00000194055 410 ntBASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm43520-201ENSMUST00000197996 164 ntBASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm43737-201ENSMUST00000199915 2740 ntBASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Gm7932-202ENSMUST00000205047 2194 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim43aQ3TL54 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm26013-201ENSMUST00000104404 119 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm8194-201ENSMUST00000159783 859 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm20392-201ENSMUST00000173047 701 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Mir7032-201ENSMUST00000185154 79 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm9369-201ENSMUST00000196009 733 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm23680-201ENSMUST00000083162 164 ntBASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Pde4d-202ENSMUST00000079975 2280 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim43aQ3TL54 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim43aQ3TL54 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms