Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm26047-201ENSMUST00000157308 113 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm4812-201ENSMUST00000182847 993 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm26047-202ENSMUST00000198840 115 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 AC133498.1-204ENSMUST00000220830 743 ntTSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 AC162934.2-201ENSMUST00000221451 249 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 AC134869.4-202ENSMUST00000224350 837 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 AC158982.1-201ENSMUST00000228377 901 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.58□□□□□ -1.04
Trim63Q38HM4 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Nmnat2-201ENSMUST00000043313 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Phc2-203ENSMUST00000106080 3885 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gm28557-203ENSMUST00000186303 3886 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Fam186b-201ENSMUST00000109100 3187 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Olfr120-202ENSMUST00000207771 1625 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Trim63Q38HM4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Sorbs2-228ENSMUST00000153798 2667 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Atrip-205ENSMUST00000161521 2381 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Pcdhb12-201ENSMUST00000055495 3034 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm5386-201ENSMUST00000121749 2450 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm17473-202ENSMUST00000228544 2071 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm42777-201ENSMUST00000196026 3603 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm12203-201ENSMUST00000118235 598 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm4993-201ENSMUST00000118719 1174 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm12209-201ENSMUST00000120089 596 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm28975-201ENSMUST00000186412 686 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm42867-201ENSMUST00000202995 469 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 AC155286.1-201ENSMUST00000218632 448 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm8598-201ENSMUST00000221184 836 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Flad1-201ENSMUST00000050398 3007 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Oacyl-202ENSMUST00000117694 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Rint1-201ENSMUST00000030852 3298 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm5893-201ENSMUST00000135286 1880 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms