Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm22582-201ENSMUST00000102283 94 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm24791-201ENSMUST00000104284 131 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm8482-201ENSMUST00000117972 471 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm13039-201ENSMUST00000118638 794 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm13841-201ENSMUST00000118829 483 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm11449-201ENSMUST00000119175 476 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm12489-201ENSMUST00000119364 148 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm11993-201ENSMUST00000121861 820 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC9.39□□□□□ -0.91
H3f3aP84244 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm8210-201ENSMUST00000178557 483 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm15454-201ENSMUST00000179718 483 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm42803-201ENSMUST00000201051 451 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC9.39□□□□□ -0.91
H3f3aP84244 AC155300.1-201ENSMUST00000219134 480 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC9.39□□□□□ -0.91
H3f3aP84244 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.39□□□□□ -0.91
H3f3aP84244 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
H3f3aP84244 Gm6344-201ENSMUST00000075962 483 ntBASIC9.39□□□□□ -0.91
H3f3aP84244 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
H3f3aP84244 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
H3f3aP84244 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.39□□□□□ -0.91
H3f3aP84244 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.38□□□□□ -0.91
H3f3aP84244 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
H3f3aP84244 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm11475-201ENSMUST00000118482 476 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Gm1826-201ENSMUST00000118646 1162 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Gm11675-201ENSMUST00000121873 832 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
H3f3aP84244 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Gm17214-201ENSMUST00000164501 541 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Mir6958-201ENSMUST00000184207 73 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Mir8111-201ENSMUST00000184463 137 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Gm8022-201ENSMUST00000191763 904 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Gm37390-201ENSMUST00000192452 872 ntBASIC9.38□□□□□ -0.91
H3f3aP84244 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
H3f3aP84244 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3aP84244 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms