Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox1P53783 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Gm26205-201ENSMUST00000082907 134 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Cox7a1-201ENSMUST00000098594 393 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox1P53783 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Sox1P53783 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox1P53783 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Gm46339-201ENSMUST00000222720 3539 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 AC125487.1-201ENSMUST00000217888 1300 ntBASIC10.84□□□□□ -0.67
Sox1P53783 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox1P53783 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Gm32540-201ENSMUST00000207174 1872 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sox1P53783 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox1P53783 Gm14156-201ENSMUST00000121538 483 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Gm12338-201ENSMUST00000122170 192 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox1P53783 Gm22876-201ENSMUST00000175450 298 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Gm34780-201ENSMUST00000193896 949 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Trav4-1-201ENSMUST00000199078 330 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Gm42402-201ENSMUST00000208341 1054 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Gm45610-201ENSMUST00000209227 784 ntBASIC10.83□□□□□ -0.68
Sox1P53783 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC10.83□□□□□ -0.68
Sox1P53783 AC172027.1-201ENSMUST00000217659 337 ntBASIC10.83□□□□□ -0.68
Sox1P53783 AC165260.2-202ENSMUST00000224998 631 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sox1P53783 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Rgr-203ENSMUST00000225070 4704 ntBASIC10.83□□□□□ -0.68
Sox1P53783 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox1P53783 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Sox1P53783 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox1P53783 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Gm44629-201ENSMUST00000206951 1840 ntBASIC10.82□□□□□ -0.68
Sox1P53783 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox1P53783 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Sox1P53783 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Sox1P53783 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox1P53783 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms