Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.79□□□□□ -0.68
ClgnP52194 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.79□□□□□ -0.68
ClgnP52194 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.79□□□□□ -0.68
ClgnP52194 Snord23-201ENSMUST00000116828 109 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Gm15264-201ENSMUST00000118050 502 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.79□□□□□ -0.68
ClgnP52194 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
ClgnP52194 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Mir6407-201ENSMUST00000184510 101 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Gm42660-201ENSMUST00000197733 947 ntBASIC10.79□□□□□ -0.68
ClgnP52194 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Gm33080-201ENSMUST00000205429 172 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Gm44814-201ENSMUST00000207018 434 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Gm18466-201ENSMUST00000209147 499 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.79□□□□□ -0.68
ClgnP52194 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
ClgnP52194 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
ClgnP52194 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
ClgnP52194 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.79□□□□□ -0.68
ClgnP52194 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.79□□□□□ -0.68
ClgnP52194 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Micall2-204ENSMUST00000170773 3157 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.79□□□□□ -0.68
ClgnP52194 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
ClgnP52194 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.79□□□□□ -0.68
ClgnP52194 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
ClgnP52194 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Gm37582-201ENSMUST00000192953 1409 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 Pml-201ENSMUST00000085673 4481 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Gm16518-201ENSMUST00000117960 508 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.78□□□□□ -0.68
ClgnP52194 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC10.78□□□□□ -0.68
ClgnP52194 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.78□□□□□ -0.68
ClgnP52194 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Gm18776-201ENSMUST00000188833 654 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Gm43671-201ENSMUST00000200422 433 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Gm42710-201ENSMUST00000200608 985 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Gm7880-201ENSMUST00000203748 871 ntBASIC10.78□□□□□ -0.68
ClgnP52194 Gm5178-201ENSMUST00000219380 898 ntBASIC10.78□□□□□ -0.68
ClgnP52194 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 CT025645.2-201ENSMUST00000223278 3827 ntBASIC10.78□□□□□ -0.68
ClgnP52194 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ClgnP52194 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
ClgnP52194 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms