Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm11662-201ENSMUST00000121389 1193 ntBASIC15.43■□□□□ 0.06
Chd1P40201 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd1P40201 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC15.43■□□□□ 0.06
Chd1P40201 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC15.43■□□□□ 0.06
Chd1P40201 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Chd1P40201 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Chd1P40201 Gm34727-201ENSMUST00000195175 529 ntBASIC15.43■□□□□ 0.06
Chd1P40201 Gm44156-201ENSMUST00000203885 1189 ntBASIC15.43■□□□□ 0.06
Chd1P40201 AC159106.2-201ENSMUST00000223732 486 ntBASIC15.43■□□□□ 0.06
Chd1P40201 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC15.43■□□□□ 0.06
Chd1P40201 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chd1P40201 Olfr1425-201ENSMUST00000087828 939 ntBASIC15.43■□□□□ 0.06
Chd1P40201 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Chd1P40201 Etfbkmt-204ENSMUST00000111551 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd1P40201 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd1P40201 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Chd1P40201 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Chd1P40201 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC15.42■□□□□ 0.06
Chd1P40201 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chd1P40201 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Gm17031-201ENSMUST00000016698 1669 ntBASIC15.42■□□□□ 0.06
Chd1P40201 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Chd1P40201 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Gm43984-201ENSMUST00000204572 2864 ntBASIC15.42■□□□□ 0.06
Chd1P40201 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Gm13675-201ENSMUST00000120616 529 ntBASIC15.42■□□□□ 0.06
Chd1P40201 Rcan2-203ENSMUST00000177857 984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC15.42■□□□□ 0.06
Chd1P40201 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC15.42■□□□□ 0.06
Chd1P40201 Gm16475-202ENSMUST00000209033 528 ntBASIC15.42■□□□□ 0.06
Chd1P40201 1700008N11Rik-201ENSMUST00000209848 636 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 AC133156.2-201ENSMUST00000226865 784 ntBASIC15.42■□□□□ 0.06
Chd1P40201 Plac8l1-201ENSMUST00000081374 763 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Olfr1229-201ENSMUST00000099788 1019 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Chd1P40201 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Chd1P40201 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chd1P40201 Zfand1-201ENSMUST00000037839 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chd1P40201 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd1P40201 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Gm16063-201ENSMUST00000156235 1701 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chd1P40201 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Gm14044-201ENSMUST00000117531 447 ntBASIC15.41■□□□□ 0.06
Chd1P40201 Gm13710-201ENSMUST00000126679 818 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Gm37020-201ENSMUST00000195303 992 ntBASIC15.41■□□□□ 0.06
Chd1P40201 Gm8689-201ENSMUST00000218709 712 ntBASIC15.41■□□□□ 0.06
Chd1P40201 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chd1P40201 Gm45088-201ENSMUST00000207066 1408 ntBASIC15.41■□□□□ 0.06
Chd1P40201 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chd1P40201 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd1P40201 Arhgef3-204ENSMUST00000225949 3198 ntBASIC15.41■□□□□ 0.06
Chd1P40201 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Polr1e-201ENSMUST00000029999 1724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Htr2b-201ENSMUST00000027431 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd1P40201 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC15.41■□□□□ 0.06
Chd1P40201 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 9130230L23Rik-203ENSMUST00000201351 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chd1P40201 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.4■□□□□ 0.06
Chd1P40201 Gm11203-201ENSMUST00000122169 741 ntBASIC15.4■□□□□ 0.06
Chd1P40201 1700031F10Rik-202ENSMUST00000156018 609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Gm24786-201ENSMUST00000157379 109 ntBASIC15.4■□□□□ 0.06
Chd1P40201 Gm23021-201ENSMUST00000158765 169 ntBASIC15.4■□□□□ 0.06
Chd1P40201 Gm21013-201ENSMUST00000184952 1201 ntBASIC15.4■□□□□ 0.06
Chd1P40201 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC15.4■□□□□ 0.06
Chd1P40201 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Chd1P40201 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd1P40201 1700034J05Rik-201ENSMUST00000036592 3007 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms