Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.77□□□□□ -1.01
Col8a2P25318 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Col8a2P25318 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC8.77□□□□□ -1.01
Col8a2P25318 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC8.77□□□□□ -1.01
Col8a2P25318 Gm11573-201ENSMUST00000119956 394 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Gm5395-201ENSMUST00000121650 915 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Gm25545-201ENSMUST00000122673 323 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC8.77□□□□□ -1.01
Col8a2P25318 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC8.77□□□□□ -1.01
Col8a2P25318 Gm8601-201ENSMUST00000182096 909 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Gm27833-201ENSMUST00000184285 124 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Col8a2P25318 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC8.77□□□□□ -1.01
Col8a2P25318 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Gm7238-201ENSMUST00000206467 973 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Olfr692-202ENSMUST00000217827 1126 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 AC154759.1-201ENSMUST00000224137 1159 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 AC158388.3-202ENSMUST00000225517 775 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Nsmce2-203ENSMUST00000227173 1122 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 AC154213.1-201ENSMUST00000228234 583 ntBASIC8.77□□□□□ -1.01
Col8a2P25318 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col8a2P25318 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col8a2P25318 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC8.77□□□□□ -1.01
Col8a2P25318 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col8a2P25318 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col8a2P25318 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Col8a2P25318 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.77□□□□□ -1.01
Col8a2P25318 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm38357-201ENSMUST00000195382 2464 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 AC129336.2-201ENSMUST00000218053 3086 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm23061-201ENSMUST00000102348 116 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm23769-201ENSMUST00000104441 121 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm8019-201ENSMUST00000119317 587 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm14052-201ENSMUST00000121434 1031 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm14148-201ENSMUST00000122433 1008 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC8.76□□□□□ -1.01
Col8a2P25318 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm20493-201ENSMUST00000173706 213 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm8525-201ENSMUST00000189674 861 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm7539-201ENSMUST00000189789 630 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm42710-201ENSMUST00000200608 985 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm7904-201ENSMUST00000217049 465 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 AC102523.1-201ENSMUST00000228706 1144 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col8a2P25318 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Rps3a2-201ENSMUST00000074245 792 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm6564-201ENSMUST00000075377 619 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col8a2P25318 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Col8a2P25318 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Gm13120-201ENSMUST00000117343 1446 ntBASIC8.76□□□□□ -1.01
Col8a2P25318 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Col8a2P25318 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC8.76□□□□□ -1.01
Col8a2P25318 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Col8a2P25318 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms