Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 A1cf-204ENSMUST00000224564 1432 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm8730-201ENSMUST00000076373 954 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Rps25-201ENSMUST00000080300 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.05□□□□□ -0.64
Hoxd8P23463 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hoxd8P23463 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm23132-201ENSMUST00000104254 132 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm8216-201ENSMUST00000117232 601 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm11929-201ENSMUST00000118175 945 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm14997-201ENSMUST00000119232 636 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm14633-201ENSMUST00000121152 470 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC11.04□□□□□ -0.64
Hoxd8P23463 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm17944-201ENSMUST00000186351 643 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm21577-201ENSMUST00000190823 697 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm20802-201ENSMUST00000190832 698 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm8083-201ENSMUST00000203976 475 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm18164-201ENSMUST00000213769 927 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm18166-201ENSMUST00000215557 927 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxd8P23463 AC154461.1-201ENSMUST00000224207 1005 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm8618-201ENSMUST00000097570 432 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.04□□□□□ -0.64
Hoxd8P23463 Gm6727-201ENSMUST00000204102 1518 ntBASIC11.04□□□□□ -0.64
Hoxd8P23463 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hoxd8P23463 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC11.03□□□□□ -0.64
Hoxd8P23463 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms