Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Usf3B2RUQ2 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Usf3B2RUQ2 Gm12745-201ENSMUST00000121767 214 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm24074-201ENSMUST00000158178 260 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm16547-201ENSMUST00000159474 293 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Snord55-201ENSMUST00000174939 79 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC8.82□□□□□ -1
Usf3B2RUQ2 AC137871.1-201ENSMUST00000228278 475 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm10020-201ENSMUST00000081993 612 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm37651-201ENSMUST00000194679 1494 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 AC134601.2-201ENSMUST00000221071 130 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 CT010480.2-201ENSMUST00000225424 737 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm45161-201ENSMUST00000207316 2263 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Usf3B2RUQ2 AC122382.1-201ENSMUST00000225869 2371 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC8.82□□□□□ -1
Usf3B2RUQ2 CT025645.2-201ENSMUST00000223278 3827 ntBASIC8.82□□□□□ -1
Usf3B2RUQ2 Gm6768-201ENSMUST00000022467 1878 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm42499-201ENSMUST00000196193 1412 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm6758-201ENSMUST00000119643 1055 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm15136-201ENSMUST00000120552 533 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC8.81□□□□□ -1
Usf3B2RUQ2 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm23647-201ENSMUST00000175042 109 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Rn5s-201ENSMUST00000177555 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s108-201ENSMUST00000177575 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s121-201ENSMUST00000177589 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s146-201ENSMUST00000177889 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm22109-201ENSMUST00000177995 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm22291-201ENSMUST00000178027 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s141-201ENSMUST00000178066 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 Gm23284-201ENSMUST00000178069 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s100-201ENSMUST00000178106 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s111-201ENSMUST00000178203 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s105-201ENSMUST00000178499 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s149-201ENSMUST00000178520 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s103-201ENSMUST00000178755 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s123-201ENSMUST00000178804 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s142-201ENSMUST00000178820 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s144-201ENSMUST00000178859 119 ntBASIC8.81□□□□□ -1
Usf3B2RUQ2 n-R5s139-201ENSMUST00000178975 119 ntBASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms