Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm28179-201ENSMUST00000188365 613 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm38007-201ENSMUST00000192187 313 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm9515-201ENSMUST00000200276 647 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm44304-201ENSMUST00000200509 145 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm19090-201ENSMUST00000218187 774 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 AC130217.1-201ENSMUST00000224146 909 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm10581-201ENSMUST00000097986 231 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rrp8Q9DB85 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 CU025215.1-201ENSMUST00000222986 603 ntBASIC10.36□□□□□ -0.75
Rrp8Q9DB85 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gm38034-201ENSMUST00000193915 2069 ntBASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 BC043934-202ENSMUST00000185694 2356 ntBASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rrp8Q9DB85 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rrp8Q9DB85 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms