Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm28195-201ENSMUST00000186992 372 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm38145-201ENSMUST00000192319 693 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm5708-201ENSMUST00000196289 886 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm44173-201ENSMUST00000204316 132 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm8960-201ENSMUST00000219787 788 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 AC130217.1-201ENSMUST00000224146 909 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm6713-201ENSMUST00000216137 1446 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm23129-201ENSMUST00000104259 132 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm5244-201ENSMUST00000164001 339 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm8557-201ENSMUST00000220777 475 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 AC141884.2-201ENSMUST00000228811 775 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nkx6-1Q99MA9 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx6-1Q99MA9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms