Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm13688-201ENSMUST00000121557 608 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm16288-201ENSMUST00000137940 367 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm20694-201ENSMUST00000176943 404 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm25591-201ENSMUST00000177317 94 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm20091-201ENSMUST00000179683 189 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm8601-201ENSMUST00000182096 909 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 AC140314.1-201ENSMUST00000219549 554 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm13505-201ENSMUST00000121666 817 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm16228-201ENSMUST00000162286 809 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm37858-201ENSMUST00000192759 1231 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm43117-201ENSMUST00000198531 379 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm44498-201ENSMUST00000199509 111 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm45090-201ENSMUST00000208775 1148 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm5650-201ENSMUST00000209641 598 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 AC116797.2-202ENSMUST00000223587 1017 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm25514-201ENSMUST00000083860 135 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Scrt1Q99M85 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Scrt1Q99M85 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.3□□□□□ -0.92
Scrt1Q99M85 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms