Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm18733-202ENSMUST00000174447 401 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm24809-201ENSMUST00000175318 271 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm8492-201ENSMUST00000182375 987 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm27953-201ENSMUST00000185171 143 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm43811-201ENSMUST00000202862 695 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm9487-201ENSMUST00000216600 472 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm26670-202ENSMUST00000226862 340 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Fhad1-203ENSMUST00000105780 4809 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim29Q8R2Q0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim29Q8R2Q0 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm14234-201ENSMUST00000119539 845 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Mrgprx3-ps-201ENSMUST00000187741 918 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm4903-201ENSMUST00000210462 405 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim29Q8R2Q0 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim29Q8R2Q0 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms