Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm8216-201ENSMUST00000117232 601 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm22876-201ENSMUST00000175450 298 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Mir6366-201ENSMUST00000184472 82 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm37976-201ENSMUST00000193827 345 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm7880-201ENSMUST00000203748 871 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Lysmd4Q8CC84 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm42777-201ENSMUST00000196026 3603 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Xrcc5-201ENSMUST00000027379 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm6655-201ENSMUST00000201932 1309 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm11380-201ENSMUST00000118067 560 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm15573-201ENSMUST00000119487 540 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Ak3l2-ps-201ENSMUST00000120282 672 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Mir8091-201ENSMUST00000183602 139 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm43378-201ENSMUST00000199336 582 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 AC124433.1-201ENSMUST00000224483 1063 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.38□□□□□ -0.91
Lysmd4Q8CC84 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.37□□□□□ -0.91
Lysmd4Q8CC84 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Lysmd4Q8CC84 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Lysmd4Q8CC84 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Lysmd4Q8CC84 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms