Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm22582-201ENSMUST00000102283 94 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm24470-201ENSMUST00000104486 132 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm28916-201ENSMUST00000186988 699 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm37141-201ENSMUST00000191938 422 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm2716-201ENSMUST00000212350 643 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm7904-201ENSMUST00000217049 465 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Sh3rf2Q8BZT2 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm23439-201ENSMUST00000104292 132 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm13171-201ENSMUST00000117233 391 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm4812-201ENSMUST00000182847 993 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.69□□□□□ -0.7
Sh3rf2Q8BZT2 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms