Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps54Q5SPW0 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.62□□□□□ -0.39
Vps54Q5SPW0 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm40879-201ENSMUST00000220759 612 ntBASIC12.62□□□□□ -0.39
Vps54Q5SPW0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm37583-201ENSMUST00000195460 2487 ntBASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps54Q5SPW0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Phtf1os-201ENSMUST00000160110 4046 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm15032-201ENSMUST00000118547 411 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm12906-201ENSMUST00000154610 441 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm26313-201ENSMUST00000157770 308 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm37020-201ENSMUST00000195303 992 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vps54Q5SPW0 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.6□□□□□ -0.39
Vps54Q5SPW0 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vps54Q5SPW0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms