Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm8603-201ENSMUST00000115649 1515 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Gm4880-201ENSMUST00000207645 1696 ntBASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Spg11Q3UHA3 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm25092-201ENSMUST00000103996 129 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm25232-201ENSMUST00000104502 132 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Chn2-203ENSMUST00000114401 1269 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Defa-ps10-201ENSMUST00000121649 171 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm25842-201ENSMUST00000122590 322 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm18118-201ENSMUST00000201064 645 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 AC139130.1-201ENSMUST00000228281 620 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm10250-201ENSMUST00000090488 482 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Hibch-202ENSMUST00000159352 1704 ntTSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm9670-201ENSMUST00000121201 540 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm25455-201ENSMUST00000157946 325 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Mark4-ps-201ENSMUST00000196140 384 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 n-R5s156-201ENSMUST00000083377 105 ntBASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Rgs9-204ENSMUST00000106706 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Gm33351-202ENSMUST00000215428 1677 ntTSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Spg11Q3UHA3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm11489-201ENSMUST00000118342 499 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm38306-201ENSMUST00000193954 237 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm5788-201ENSMUST00000220499 435 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Mir187-201ENSMUST00000083598 61 ntBASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Gm11100-201ENSMUST00000112652 1951 ntTSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Spg11Q3UHA3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 141.6 ms